PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG027210.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 221aa    MW: 23789.7 Da    PI: 6.5125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG027210.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.2e-1950103156
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       + ++GVr++ + grWv+e+r+p e+g  +r +lg++ tae Aa+a++aa++ l+g+
  TRIDC6AG027210.1  50 PVFRGVRRRGSAGRWVCEVRVPGERG--TRLWLGTYITAEAAARAHDAAMLMLRGH 103
                       579*******************6655..*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
IDRQPAAMDM SLEHSSSPSS SSTTERAGTA WPWPPKRPAG RTKFRETRHP VFRGVRRRGS  60
AGRWVCEVRV PGERGTRLWL GTYITAEAAA RAHDAAMLML RGHSAACLNF RDSAWLLAVP  120
PAFTNLSDVR RAAVQAVADF LRRPEATSAA AAVQEVTSSV SAPSSAVCSV PSSETAQASP  180
DAAFEAPAAL DMDVFDLDCL FGETDSDAYY YANLAQGLLM E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.16e-29ERF family protein