PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG014880.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 1088aa MW: 121563 Da PI: 6.6489

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG014880.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.3	2.5e-22	85	186	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++p++ ae++ +++++++ +l+ +d + ++W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F ++ TRIDC6AG014880.7 85 FCKTLTASDTSTHGGFSVPRRAAEKIfpsldfSLQPPCQ-ELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSLFVSGKKLFAGDSVIFV--RD 174 99****************************9999986.*********************************************..56 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 ++++l+++++r+ TRIDC6AG014880.7 175 EKQQLLLGIRRA 186 88889**997 PP
2	Auxin_resp	114.1	1.3e-37	211	294	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aaha +++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+ ete+ +rr++Gt++g+sdldpvrW+nS+WrsL+ TRIDC6AG014880.7 211 AAHASANTSPFTIFYNPRASPTEFVIPFAKYQKAMYsSQISLGMRFRMMCETEELGTRRYMGTITGISDLDPVRWKNSQWRSLQ 294 799******************************9899*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1088 aa Download sequence
PRRLLPPRPQ RAASMQKDVE AHVPSYPNLP SKLICLLHSV TLQADPDTDE VYAQMTLQPV 60 NTYAKEALQL SELALRQARP QMEFFCKTLT ASDTSTHGGF SVPRRAAEKI FPSLDFSLQP 120 PCQELQARDI HDNVWTFRHI FRGQPKRHLL TTGWSLFVSG KKLFAGDSVI FVRDEKQQLL 180 LGIRRANRQP TNISSSVLSS DSMHIGVLAA AAHASANTSP FTIFYNPRAS PTEFVIPFAK 240 YQKAMYSSQI SLGMRFRMMC ETEELGTRRY MGTITGISDL DPVRWKNSQW RSLQVGWDES 300 AAGERRNRVS IWEIEPLAAP FFICPQPFFG VKRPRQLDDE SLEMESLMKR AMPWLGEEVC 360 IKDPQTQSAT MPGLSLVQWM NMNRQQSSSL ASTAMQSEYL RSASNPAMQN IGAADLARQL 420 YMQNHLLQQN SMQFNPPKLH QQMKPINDLS NAALPLNQLS AIRNHQDQKQ DQQRQQQSSI 480 QAIPLSQAQA QTNIVQAQVI LQNQMQQQQQ QKQPPPSPTQ NQHGASGQHL LQSHQLQDQN 540 LQMQQQQLLL HQQLQQQQQQ QQLNKLPGQL ANLASQQTQL SDQELHLQLL QKLQQQSLMS 600 QSAVTLSRLP IIQEQQNFLV DMQQQLSNSH SLAQQQVMPQ QDCRTSSLQT TQLPPPIQQE 660 QQQQQQQKPS QKQVAPTYVS EAAFAQISST SVIPKTGNAT IVPGAAQSAV TEEIPSCSTS 720 PSTANGNHLA QPTIGRNDHC KTSTEKVPHS IAQMSILIPI EAVSVTPVTT KELPKLNNGV 780 KSSAITSKLP NVVSGLQNFM NNALPTDNLE TASSATSLWP SQTDGLLHQG FATSNFNQHQ 840 MFKDELPDVE IQGVDPSNSA LFGMNNDGPL GFPMETEGLL ENALDSVKYQ NHFSTDDENN 900 YQMQKDARQE ISTSMVSQSF GQSDMAFNSI DSAINDGALM NRSSWPPAAP PQRMRTFTKV 960 YKRGAVGRSI DIGRFSGYGE LNQALARMFG IEGQLEDRQR IGWKLVYTDH EDDVLLLGDD 1020 PWEEFVNCVK CIRILSPQEV QKMSLDGDLG SNVLPNQACS SSDGGNTWKP RYEQNSGNPS 1080 IGPYDQFE

Sequence ? help Back to Top

Protein Sequence Length: 1088 aa Download sequence

PRRLLPPRPQ RAASMQKDVE AHVPSYPNLP SKLICLLHSV TLQADPDTDE VYAQMTLQPV  60
NTYAKEALQL SELALRQARP QMEFFCKTLT ASDTSTHGGF SVPRRAAEKI FPSLDFSLQP  120
PCQELQARDI HDNVWTFRHI FRGQPKRHLL TTGWSLFVSG KKLFAGDSVI FVRDEKQQLL  180
LGIRRANRQP TNISSSVLSS DSMHIGVLAA AAHASANTSP FTIFYNPRAS PTEFVIPFAK  240
YQKAMYSSQI SLGMRFRMMC ETEELGTRRY MGTITGISDL DPVRWKNSQW RSLQVGWDES  300
AAGERRNRVS IWEIEPLAAP FFICPQPFFG VKRPRQLDDE SLEMESLMKR AMPWLGEEVC  360
IKDPQTQSAT MPGLSLVQWM NMNRQQSSSL ASTAMQSEYL RSASNPAMQN IGAADLARQL  420
YMQNHLLQQN SMQFNPPKLH QQMKPINDLS NAALPLNQLS AIRNHQDQKQ DQQRQQQSSI  480
QAIPLSQAQA QTNIVQAQVI LQNQMQQQQQ QKQPPPSPTQ NQHGASGQHL LQSHQLQDQN  540
LQMQQQQLLL HQQLQQQQQQ QQLNKLPGQL ANLASQQTQL SDQELHLQLL QKLQQQSLMS  600
QSAVTLSRLP IIQEQQNFLV DMQQQLSNSH SLAQQQVMPQ QDCRTSSLQT TQLPPPIQQE  660
QQQQQQQKPS QKQVAPTYVS EAAFAQISST SVIPKTGNAT IVPGAAQSAV TEEIPSCSTS  720
PSTANGNHLA QPTIGRNDHC KTSTEKVPHS IAQMSILIPI EAVSVTPVTT KELPKLNNGV  780
KSSAITSKLP NVVSGLQNFM NNALPTDNLE TASSATSLWP SQTDGLLHQG FATSNFNQHQ  840
MFKDELPDVE IQGVDPSNSA LFGMNNDGPL GFPMETEGLL ENALDSVKYQ NHFSTDDENN  900
YQMQKDARQE ISTSMVSQSF GQSDMAFNSI DSAINDGALM NRSSWPPAAP PQRMRTFTKV  960
YKRGAVGRSI DIGRFSGYGE LNQALARMFG IEGQLEDRQR IGWKLVYTDH EDDVLLLGDD  1020
PWEEFVNCVK CIRILSPQEV QKMSLDGDLG SNVLPNQACS SSDGGNTWKP RYEQNSGNPS  1080
IGPYDQFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG014880.7