PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG014880.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 1094aa MW: 121940 Da PI: 6.5801

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG014880.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.3	2.5e-22	91	192	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++p++ ae++ +++++++ +l+ +d + ++W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F ++ TRIDC6AG014880.6 91 FCKTLTASDTSTHGGFSVPRRAAEKIfpsldfSLQPPCQ-ELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSLFVSGKKLFAGDSVIFV--RD 180 99****************************9999986.*********************************************..56 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 ++++l+++++r+ TRIDC6AG014880.6 181 EKQQLLLGIRRA 192 88889**997 PP
2	Auxin_resp	114.1	1.3e-37	217	300	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aaha +++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+ ete+ +rr++Gt++g+sdldpvrW+nS+WrsL+ TRIDC6AG014880.6 217 AAHASANTSPFTIFYNPRASPTEFVIPFAKYQKAMYsSQISLGMRFRMMCETEELGTRRYMGTITGISDLDPVRWKNSQWRSLQ 300 799******************************9899*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1094 aa Download sequence
RWAASSSTSP KATASRVAAS MQKDVEAHVP SYPNLPSKLI CLLHSVTLQA DPDTDEVYAQ 60 MTLQPVNTYA KEALQLSELA LRQARPQMEF FCKTLTASDT STHGGFSVPR RAAEKIFPSL 120 DFSLQPPCQE LQARDIHDNV WTFRHIFRGQ PKRHLLTTGW SLFVSGKKLF AGDSVIFVRD 180 EKQQLLLGIR RANRQPTNIS SSVLSSDSMH IGVLAAAAHA SANTSPFTIF YNPRASPTEF 240 VIPFAKYQKA MYSSQISLGM RFRMMCETEE LGTRRYMGTI TGISDLDPVR WKNSQWRSLQ 300 VGWDESAAGE RRNRVSIWEI EPLAAPFFIC PQPFFGVKRP RQLDDESLEM ESLMKRAMPW 360 LGEEVCIKDP QTQSATMPGL SLVQWMNMNR QQSSSLASTA MQSEYLRSAS NPAMQNIGAA 420 DLARQLYMQN HLLQQNSMQF NPPKLHQQMK PINDLSNAAL PLNQLSAIRN HQDQKQDQQR 480 QQQSSIQAIP LSQAQAQTNI VQAQVILQNQ MQQQQQQKQP PPSPTQNQHG ASGQHLLQSH 540 QLQDQNLQMQ QQQLLLHQQL QQQQQQQQLN KLPGQLANLA SQQTQLSDQE LHLQLLQKLQ 600 QQSLMSQSAV TLSRLPIIQE QQNFLVDMQQ QLSNSHSLAQ QQVMPQQDCR TSSLQTTQLP 660 PPIQQEQQQQ QQQKPSQKQV APTYVSEAAF AQISSTSVIP KTGNATIVPG AAQSAVTEEI 720 PSCSTSPSTA NGNHLAQPTI GRNDHCKTST EKVPHSIAQM SILIPIEAVS VTPVTTKELP 780 KLNNGVKSSA ITSKLPNVVS GLQNFMNNAL PTDNLETASS ATSLWPSQTD GLLHQGFATS 840 NFNQHQMFKD ELPDVEIQGV DPSNSALFGM NNDGPLGFPM ETEGLLENAL DSVKYQNHFS 900 TDDENNYQMQ KDARQEISTS MVSQSFGQSD MAFNSIDSAI NDGALMNRSS WPPAAPPQRM 960 RTFTKVYKRG AVGRSIDIGR FSGYGELNQA LARMFGIEGQ LEDRQRIGWK LVYTDHEDDV 1020 LLLGDDPWEE FVNCVKCIRI LSPQEVQKMS LDGDLGSNVL PNQACSSSDG GNTWKPRYEQ 1080 NSGNPSIGPY DQFE

Sequence ? help Back to Top

Protein Sequence Length: 1094 aa Download sequence

RWAASSSTSP KATASRVAAS MQKDVEAHVP SYPNLPSKLI CLLHSVTLQA DPDTDEVYAQ  60
MTLQPVNTYA KEALQLSELA LRQARPQMEF FCKTLTASDT STHGGFSVPR RAAEKIFPSL  120
DFSLQPPCQE LQARDIHDNV WTFRHIFRGQ PKRHLLTTGW SLFVSGKKLF AGDSVIFVRD  180
EKQQLLLGIR RANRQPTNIS SSVLSSDSMH IGVLAAAAHA SANTSPFTIF YNPRASPTEF  240
VIPFAKYQKA MYSSQISLGM RFRMMCETEE LGTRRYMGTI TGISDLDPVR WKNSQWRSLQ  300
VGWDESAAGE RRNRVSIWEI EPLAAPFFIC PQPFFGVKRP RQLDDESLEM ESLMKRAMPW  360
LGEEVCIKDP QTQSATMPGL SLVQWMNMNR QQSSSLASTA MQSEYLRSAS NPAMQNIGAA  420
DLARQLYMQN HLLQQNSMQF NPPKLHQQMK PINDLSNAAL PLNQLSAIRN HQDQKQDQQR  480
QQQSSIQAIP LSQAQAQTNI VQAQVILQNQ MQQQQQQKQP PPSPTQNQHG ASGQHLLQSH  540
QLQDQNLQMQ QQQLLLHQQL QQQQQQQQLN KLPGQLANLA SQQTQLSDQE LHLQLLQKLQ  600
QQSLMSQSAV TLSRLPIIQE QQNFLVDMQQ QLSNSHSLAQ QQVMPQQDCR TSSLQTTQLP  660
PPIQQEQQQQ QQQKPSQKQV APTYVSEAAF AQISSTSVIP KTGNATIVPG AAQSAVTEEI  720
PSCSTSPSTA NGNHLAQPTI GRNDHCKTST EKVPHSIAQM SILIPIEAVS VTPVTTKELP  780
KLNNGVKSSA ITSKLPNVVS GLQNFMNNAL PTDNLETASS ATSLWPSQTD GLLHQGFATS  840
NFNQHQMFKD ELPDVEIQGV DPSNSALFGM NNDGPLGFPM ETEGLLENAL DSVKYQNHFS  900
TDDENNYQMQ KDARQEISTS MVSQSFGQSD MAFNSIDSAI NDGALMNRSS WPPAAPPQRM  960
RTFTKVYKRG AVGRSIDIGR FSGYGELNQA LARMFGIEGQ LEDRQRIGWK LVYTDHEDDV  1020
LLLGDDPWEE FVNCVKCIRI LSPQEVQKMS LDGDLGSNVL PNQACSSSDG GNTWKPRYEQ  1080
NSGNPSIGPY DQFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG014880.6