PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG012550.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 386aa    MW: 42396.4 Da    PI: 4.5588
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG012550.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.77.1e-19119169155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+++G+r+++ +g+W+AeIrdps+    +r++lg+f +aeeAa+a++  +++++g
  TRIDC6AG012550.4 119 SQFRGIRQRP-WGKWAAEIRDPSK---GARVWLGTFNSAEEAARAYDVEARRIRG 169
                       789*******.**********965...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MCGGASLADV KVPTVTWKVT KAALCPKKKK PRHGSNGGRC FTGLGGRMGP DVDDNEEDFE  60
AELEVFEVNF GDSDVELGRT RVDEKDDDNE VVEINSFAAA KSSLSQGFDG PSAKRKRKSQ  120
FRGIRQRPWG KWAAEIRDPS KGARVWLGTF NSAEEAARAY DVEARRIRGN KAKVNFPKEP  180
IVPQKRRARP GAPKAPKLSV ASEPSVMPSV NNLSNPNAFI YPSANFASNQ PLALPDNLSF  240
FPIMNSDGPV EASVMNQYSD QGINSFSFSD LEWDYNTKNL DIPSIAPIST ITEGAEYALA  300
QSNAYNSVVI PEGAESALAQ SNTYNLVVPH VMENNGVDFN AWPRFLMDDE VDEPIDSLLN  360
FDVPQDVVVN MDLWSFDGMP MCGEFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.11e-32ERF family protein