PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG012550.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 416aa    MW: 45524 Da    PI: 4.4846
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG012550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.9e-19149199155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+++G+r+++ +g+W+AeIrdps+    +r++lg+f +aeeAa+a++  +++++g
  TRIDC6AG012550.1 149 SQFRGIRQRP-WGKWAAEIRDPSK---GARVWLGTFNSAEEAARAYDVEARRIRG 199
                       789*******.**********965...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
LCFNKKVTNL PIPATPPPPD DDFGEVPAAI MCGGASLADV KVPTVTWKVT KAALCPKKKK  60
PRHGSNGGRC FTGLGGRMGP DVDDNEEDFE AELEVFEVDF GDSDVELGRT RVDEKDDDNE  120
VVEIKSFAAA KSSLSQGFDG PSAKRKRKSQ FRGIRQRPWG KWAAEIRDPS KGARVWLGTF  180
NSAEEAARAY DVEARRIRGN KAKVNFPKEP IVPQKRRARP GAPKAPKLSV ASEPSVMPSV  240
NNLSNPNAFI YPSANFASNQ PLALPDNLSF VPIMNSDGPV EASVMNQYSD QGINSFSFSD  300
LEWDYNTKNL DIPSIAPIST ITEGAEYALA QSNAYNSVVI PEGAESALAQ SNTYNLVVPH  360
VMENNGVDFD AWPRFLMDDE VDEPIDSLLN FDVPQDVVVN MDLWSFDGMP MCGEFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.14e-32ERF family protein