PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG001380.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 220aa MW: 23649.7 Da PI: 5.7842 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 100.2 | 1.6e-31 | 27 | 112 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k+ev aLi++r+ +++r+++ lk+plWeevs++m++ g+ rs+k+Ckekwen+nk+++k ke+ kkr + + +tcpyfd+l+ TRIDC6AG001380.3 27 RWPKHEVEALIRVRSGLDNRFQEPGLKGPLWEEVSARMAAAGYgGRSAKRCKEKWENINKYFRKAKESGKKR-PAHAKTCPYFDELD 112 8******************************************99*************************98.99999*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
TSHDAGRELV PYECGELSLP LMSSSSRWPK HEVEALIRVR SGLDNRFQEP GLKGPLWEEV 60 SARMAAAGYG GRSAKRCKEK WENINKYFRK AKESGKKRPA HAKTCPYFDE LDRLYSRSGH 120 GSGASSGAGN TSAKAIANAI ATADDAANKA SSELLDAVVK YPTDTHYGPP PGFPNDGKED 180 GAAQHDGEGD VDMGRASGRA GEDHDDEAGQ SHGHDDDDDH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76890.2 | 2e-39 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG001380.3 |