PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG001260.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 442aa    MW: 47748.5 Da    PI: 6.7619
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG001260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like56.18.3e-18192248155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgL..tlehvkSHLQkYRl 55 
                       k++++Wt+e+He Fv+av+qL  +   tP +i+e+++++g+  t ++v SHLQkYR+
  TRIDC6AG001260.1 192 KKKVKWTTEMHELFVNAVSQLKTTGDDTPNNIREFLEIDGIyvTTAQVSSHLQKYRS 248
                       689*******************999***************65599***********7 PP
2Myb_DNA-binding21.84.3e-07194247148
                       TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.....TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.....kgRtlkqcksrwqkyl 48 
                       + +WTte +el+v+av ql +    t++ I + +         t  q+ s++qky+
  TRIDC6AG001260.1 194 KVKWTTEMHELFVNAVSQLKTTgddTPNNIREFLEidgiyV--TTAQVSSHLQKYR 247
                       579*****************99**************99875..789********97 PP
3Response_reg40.61.4e-14211281107
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT..SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg..mdGlellkeireeepklpiivvtahgeeedalea 89 
                       vl vdD+p+ ++ l+q+l++ gy ev++ +++ +al+ ++++   +D i++  +  g  mdG+ l+k+  +    + ++++++ +++e++++ 
  TRIDC6AG001260.1  21 VLAVDDDPVCLQTLTQMLRRGGY-EVTASASPADALKEVEKNPdgIDFIMTVARTRGrgMDGFGLVKRVGKCY--PVVLMFSGDETMETRERG 110
                       799********************.99999999999999988888999999987777666**********7766..699999************ PP

                       HHTTESEEEESS--HHHH CS
      Response_reg  90 lkaGakdflsKpfdpeel 107
                       l+ Ga     Kp    ++
  TRIDC6AG001260.1 111 LQEGACYLMDKPLRDMQI 128
                       ************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MANGDEDMAT TELMGTEGLK VLAVDDDPVC LQTLTQMLRR GGYEVTASAS PADALKEVEK  60
NPDGIDFIMT VARTRGRGMD GFGLVKRVGK CYPVVLMFSG DETMETRERG LQEGACYLMD  120
KPLRDMQIYF IWQQVVRWRH KAAGAATENP NPRHSQGVHL DDTPRKRGQG LNDSNKGKGA  180
SEGGLQLGTT KKKKVKWTTE MHELFVNAVS QLKTTGDDTP NNIREFLEID GIYVTTAQVS  240
SHLQKYRSDC RKGGLSTMPS SRPPHSNNTS KNYSESQESE GSYRFHMKSQ GARDINQASW  300
LSGGASQVDY GILGNGNHST NLGAGATYGH GYHHANGIGD INGDDHHYAT LSANDYDHHY  360
GKGNNKSYGY PHGNSSDNNY GNGNEGSGGV IASGSMVSAS LSSNLAPAVQ HGMRGDASAG  420
QTSAVQPQNL DSVFLNWGNT SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.24e-24ARR-B family protein