PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG001250.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 225aa MW: 25389.9 Da PI: 8.8679 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.4 | 1.6e-27 | 9 | 58 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rie+ + rqvtfskRr g+lKKA+EL vLCdaeva+i+fs++g+lyey+s TRIDC6AG001250.6 9 RIEDATSRQVTFSKRRSGLLKKAFELGVLCDAEVALIVFSPRGRLYEYAS 58 8***********************************************86 PP | |||||||
2 | K-box | 74.5 | 3e-25 | 82 | 175 | 6 | 99 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++ +a + ++ e++ Lk +i+ ++ qR+l Ge+L+s+s eLq+Le qLeksl+ iR+kK++ +l++i el++ke++l en Lrk++ TRIDC6AG001250.6 82 TVEQPAAGVQMCRSEATALKHKIDAIEAYQRKLSGEGLGSCSAHELQELELQLEKSLSCIRQKKQQKMLDKILELKEKERKLLTENSVLRKEY 174 444677888999******************************************************************************998 PP K-box 99 e 99 + TRIDC6AG001250.6 175 K 175 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
KRGRREMRRI EDATSRQVTF SKRRSGLLKK AFELGVLCDA EVALIVFSPR GRLYEYASAP 60 DLQKTIDRYL NHTKGTSTNE KTVEQPAAGV QMCRSEATAL KHKIDAIEAY QRKLSGEGLG 120 SCSAHELQEL ELQLEKSLSC IRQKKQQKML DKILELKEKE RKLLTENSVL RKEYKALPLL 180 ELATAAAAER SPDGAGAEEA EEDERRRHYM EVETELVIGR PGSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-49 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG001250.6 |