PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG000490.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 377aa MW: 41339.3 Da PI: 6.6218

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG000490.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.7	4.2e-48	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppG+rF+Ptd el+ +yLk+k+ gkkl+ + ++e+diy++ PwdLp k ++ +++ +wyfF++ +ky+tg+r+nr+ ++g Wkatgkd++ TRIDC6AG000490.1 6 LPPGYRFQPTDAELILYYLKRKILGKKLRR-NPVTEIDIYQFAPWDLPgKsSMPTGDLQWYFFCTCGRKYPTGSRTNRSNQAGHWKATGKDRK 97 79***********************999.88***********5346667888******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v++ ++++vg+k+tLvf+ g+ +k ++tdWvmheyrl TRIDC6AG000490.1 98 VVC-NSRTVGMKRTLVFHAGKGRKEKRTDWVMHEYRL 133 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MEMAPLPPGY RFQPTDAELI LYYLKRKILG KKLRRNPVTE IDIYQFAPWD LPGKSSMPTG 60 DLQWYFFCTC GRKYPTGSRT NRSNQAGHWK ATGKDRKVVC NSRTVGMKRT LVFHAGKGRK 120 EKRTDWVMHE YRLVESEVPN AGVRLDDFVL CKVYQKSGPG PRIGEQYGAP LEEEEEEMND 180 ANGEAYCLSH SSAPGPSHGG VLNFAGQSVS DGGRVSLSLL SANNGKSSSS GVRPDRASHP 240 DVNWDRIHIQ QLADILGFLS TNPVGQDGPP SDSTAYHDTE ALFDDSEAIF DIADQVVPSS 300 LVSLCKQCDS CGVRLVDPFL EPVAGELYLE LNDLLLCHAG HVPHGSSHEG PQHWIRQRPF 360 VHSSSAASGT VSAAVSG

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MEMAPLPPGY RFQPTDAELI LYYLKRKILG KKLRRNPVTE IDIYQFAPWD LPGKSSMPTG  60
DLQWYFFCTC GRKYPTGSRT NRSNQAGHWK ATGKDRKVVC NSRTVGMKRT LVFHAGKGRK  120
EKRTDWVMHE YRLVESEVPN AGVRLDDFVL CKVYQKSGPG PRIGEQYGAP LEEEEEEMND  180
ANGEAYCLSH SSAPGPSHGG VLNFAGQSVS DGGRVSLSLL SANNGKSSSS GVRPDRASHP  240
DVNWDRIHIQ QLADILGFLS TNPVGQDGPP SDSTAYHDTE ALFDDSEAIF DIADQVVPSS  300
LVSLCKQCDS CGVRLVDPFL EPVAGELYLE LNDLLLCHAG HVPHGSSHEG PQHWIRQRPF  360
VHSSSAASGT VSAAVSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	2e-55	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG000490.1