PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG083350.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 300aa    MW: 34392.1 Da    PI: 7.3292
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG083350.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix67.33.2e-2129109286
           trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                        W++ e+++Li++++++++rlrrg+lk+++We+v++ +  r +g +++ +qC++k+e+l+kry+ ++++         s +p+f+++e
  TRIDC5BG083350.10  29 WSDGETMHLIDVYEDRWTRLRRGQLKAHQWEDVAADVtrRCGGQRKTGTQCRHKLEKLRKRYRTEAARPVT------SLWPFFRRME 109
                        *************************************877889999******************9998885......68*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
FPPDPDLNRR PPPRGHPMEA RKSAPGQPWS DGETMHLIDV YEDRWTRLRR GQLKAHQWED  60
VAADVTRRCG GQRKTGTQCR HKLEKLRKRY RTEAARPVTS LWPFFRRMER LERGPVPVST  120
NSFPASPPAS DDDQDQDQDH DLDLDLDQEE EEEDEEEENR SINGLVRDAG GFRGHQQQQQ  180
RRRPSPPAVT LSTAPPRKRV SYEAAMFQSK AAAADRVKAE EAPAVDHHSV AGVLRDIGEG  240
IKRLERRRME VQWEIERGWK ETEARSNQML QDAQRQLQDT LAALPPTGKK ARRDHGSSAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.15e-23Trihelix family protein