PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG082470.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 163aa    MW: 17760.6 Da    PI: 6.7753
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG082470.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.42.5e-172422059
                      S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY 20 fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                        r+YYrC+s+ gC ++k+vers++dp++++itY+ eHnh+
  TRIDC5BG082470.4  2 ACRGYYRCSSSkGCLARKQVERSRSDPNMLVITYTAEHNHP 42
                      579******998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
PACRGYYRCS SSKGCLARKQ VERSRSDPNM LVITYTAEHN HPWPMQRNVL AGYARAHTHA  60
AAKKQQKISS SSSADNAASS SSSNSFHVEQ INPICGDQLP VSCKMPDSTA TAGDGGGLLF  120
EGIQPDEVFA ELEELETDNN PMMTSANVYG SRGVSSNYEW HKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.12e-27WRKY family protein