PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG082230.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 282aa    MW: 31116.1 Da    PI: 6.9335
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG082230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.85.2e-181663148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd +lv +++q+G+g+W+++++  g+ R+ k+c++rw +yl
  TRIDC5BG082230.1 16 KGPWTPEEDIILVSYIQQHGPGNWRSVPENTGLMRCSKSCRLRWTNYL 63
                      79********************************************97 PP
2Myb_DNA-binding475.9e-1569114148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T+ E+ +++++ ++lG++ W++Ia++++  Rt++++k++w+++l
  TRIDC5BG082230.1  69 RGNFTQHEEGIIIHLQALLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 114
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MGRPPCCDNG GASVKKGPWT PEEDIILVSY IQQHGPGNWR SVPENTGLMR CSKSCRLRWT  60
NYLRPGIKRG NFTQHEEGII IHLQALLGNK WAAIASYLPQ RTDNDIKNYW NTHLKKKVKR  120
LQQQTHPADH FFQHTSTATN AAEQTISMNY YNPSSSNLDS AMQAAMGYPE TTTGNVAPAA  180
MAVSKLFQSW MPKAPSPEMA DYKGMVAMQE FQTDREDGAT ASMTSGHRFS SSEILAGRDE  240
AATATTFSVL ENWLLDDMAP GQAAMDGLMD ISAGCCANPI MF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.13e-80MYB family protein