PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG079080.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 783aa MW: 88957 Da PI: 6.9748

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG079080.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.2	5.4e-18	34	118	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA ++GF v+++ks+ + + g + + +vC+++g+ +e+ + r++ +t+C+a+++ +++ dg ++t+++leHnH+l+p TRIDC5BG079080.2 34 NFYKRYALRTGFGVCVKKSSFT-KAGLCRRLLLVCNRWGNGKEDACY-----QARPTAKTNCQATVVARLWGDGMLHLTDVSLEHNHPLNP 118 6***************9998.6777************9999.....999*******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 783 aa Download sequence
SVELDAAADR APPYGDDRTP RDGMVFKSYE EVLNFYKRYA LRTGFGVCVK KSSFTKAGLC 60 RRLLLVCNRW GNGKEDACYQ ARPTAKTNCQ ATVVARLWGD GMLHLTDVSL EHNHPLNPSA 120 ARFLRCYKTL PSGMSKDLVV RAARGECATS GGDVEAPPMF DDWGRLKIRD GDVQAINCFF 180 AEMQAKQPNF FYVMDFYVEG HLRSVLWADS RSREAYQYFS DAIWVDTTCL RSKFNVPLVL 240 FLGVNHHGQL VLLGCGLLSD ESTESLLWLF KAWLTCMKGR LPGAMITDES VAIKAAVREV 300 FPKTRHRISD WHIVRSIAEK LGELPEYESI KVQMEAVIYG SLKDDQFETR WKNLINRFSL 360 QDNEWVIFLY ENRHLWVPSF LKDAFWAGLS VNHRESPGAF FDGSVSHETT LVSFLSNYMI 420 LVQYKYKMEQ QDDFESLTSG RVLVSKFPME EQISKLYTMN MFVKFQDELK STLDCQVQQV 480 SPSSFVVIDL AEQGTGLVTR KYEVVHCMET NRMECNCGLF QFSGIVCRHA LSVLKWQQVY 540 DIPPCYVLNR WRSDFKQLHA LDNPLKDPLV ASNHVERYDH ISLQCLRLVE IGMVSDDKYQ 600 HALKLISDMK RTLLDDNLCR ELEQKMSPPE RAVVVNGDSH AQPGSSEGGP AKKRRGRPPK 660 RSKEISVESV SNQCGNKESL LVSSDVSQKG ALHSSSTASN LGTHVRAHGV DDLMEEVNAN 720 EVSFESRYGV QSSHPNHYGD QLHPGHTLQF GQHMPSAEQS RGVEWVYPTI YQDDQVPYGR 780 RTS

Sequence ? help Back to Top

Protein Sequence Length: 783 aa Download sequence

SVELDAAADR APPYGDDRTP RDGMVFKSYE EVLNFYKRYA LRTGFGVCVK KSSFTKAGLC  60
RRLLLVCNRW GNGKEDACYQ ARPTAKTNCQ ATVVARLWGD GMLHLTDVSL EHNHPLNPSA  120
ARFLRCYKTL PSGMSKDLVV RAARGECATS GGDVEAPPMF DDWGRLKIRD GDVQAINCFF  180
AEMQAKQPNF FYVMDFYVEG HLRSVLWADS RSREAYQYFS DAIWVDTTCL RSKFNVPLVL  240
FLGVNHHGQL VLLGCGLLSD ESTESLLWLF KAWLTCMKGR LPGAMITDES VAIKAAVREV  300
FPKTRHRISD WHIVRSIAEK LGELPEYESI KVQMEAVIYG SLKDDQFETR WKNLINRFSL  360
QDNEWVIFLY ENRHLWVPSF LKDAFWAGLS VNHRESPGAF FDGSVSHETT LVSFLSNYMI  420
LVQYKYKMEQ QDDFESLTSG RVLVSKFPME EQISKLYTMN MFVKFQDELK STLDCQVQQV  480
SPSSFVVIDL AEQGTGLVTR KYEVVHCMET NRMECNCGLF QFSGIVCRHA LSVLKWQQVY  540
DIPPCYVLNR WRSDFKQLHA LDNPLKDPLV ASNHVERYDH ISLQCLRLVE IGMVSDDKYQ  600
HALKLISDMK RTLLDDNLCR ELEQKMSPPE RAVVVNGDSH AQPGSSEGGP AKKRRGRPPK  660
RSKEISVESV SNQCGNKESL LVSSDVSQKG ALHSSSTASN LGTHVRAHGV DDLMEEVNAN  720
EVSFESRYGV QSSHPNHYGD QLHPGHTLQF GQHMPSAEQS RGVEWVYPTI YQDDQVPYGR  780
RTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-116	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG079080.2