PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG076210.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 346aa MW: 38774.2 Da PI: 6.3118

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG076210.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.8	2.6e-10	65	125	33	98
-SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 s ++le ++g+ ++v++ k g ++lt+GW++Fv+ n++++gD ++F + g+s+f +v+++ TRIDC5BG076210.7 65 SEPIKLEAPDGQMYSVEF---VKFGLITLTTGWRRFVDGNHIQQGDPILFVYCGSSTF--KVHICT 125 445999999999999999...5556799*************************99999..888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MDTDEFFNPG CGGPAGDGCD CGDCEEWRHD HGRTKHFLLF ASDHKDFLCT PWEVTRQLRI 60 MITDSEPIKL EAPDGQMYSV EFVKFGLITL TTGWRRFVDG NHIQQGDPIL FVYCGSSTFK 120 VHICTSSGHK NSLPCSQQPP NILRAVLLRD RHVLNEQVVP DPAHVQTSTD FGYTMFPGTC 180 LSKAQEKKVL ELADSSMRSE IPLHVAPMNK RNASKDYYVC IPLRLLDNFK EGITETVIQL 240 EAHGNNMVYS VGVSKHSDDQ IILQSELSDF VASLRIQDND LLVFRSKRKA RLEVLVLDPS 300 GCEKTCFAMG NSSNAQEMAL TSSPCIKSGH SIVVSYPVRF FPFTIF

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MDTDEFFNPG CGGPAGDGCD CGDCEEWRHD HGRTKHFLLF ASDHKDFLCT PWEVTRQLRI  60
MITDSEPIKL EAPDGQMYSV EFVKFGLITL TTGWRRFVDG NHIQQGDPIL FVYCGSSTFK  120
VHICTSSGHK NSLPCSQQPP NILRAVLLRD RHVLNEQVVP DPAHVQTSTD FGYTMFPGTC  180
LSKAQEKKVL ELADSSMRSE IPLHVAPMNK RNASKDYYVC IPLRLLDNFK EGITETVIQL  240
EAHGNNMVYS VGVSKHSDDQ IILQSELSDF VASLRIQDND LLVFRSKRKA RLEVLVLDPS  300
GCEKTCFAMG NSSNAQEMAL TSSPCIKSGH SIVVSYPVRF FPFTIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57720.1	3e-07	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG076210.7