PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG073000.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 440aa MW: 48390.8 Da PI: 7.1878

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG073000.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.4	3e-17	112	161	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC5BG073000.4 112 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 161 78*****************......55**********************998 PP
2	AP2	41.6	3.2e-13	204	254	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ +++g TRIDC5BG073000.4 204 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 254 89******.7**...5...334336******99********99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MVLDLNVESP ADSGTSSSSV LNSADAGGFR FGLLGSPDDD DWSGEPAPAA SGFVTRQLFP 60 ASPPAPGMMM GQQAPAPPMA PVWQPRRAEE LVAAQRVAPA KKTRRGPRSR SSQYRGVTFY 120 RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GLEADINFNL SDYEEDLKQM 180 RNWTKEEFVH ILRRQSTGFA RGSSKYRGVT LHKCGRWEAR MGQLLGKKYI YLGLFDSEVE 240 AARAYDRAAI RFNGREAVTN FESSSYNGDA PPDAENEAIV DADALDLDLR MSQPTAHDPK 300 RDNIVAGLQL TFDSPESSTT MLSSQPMSSS SSQWPVHQHG TAVPPQQHQR LYPSACHGFY 360 PNVQVQVQER PMEARPPEPP SCFPGWGWQA QATPPGSSHS PLLYAAASSG FSTAAGAHPA 420 PPPPSYPDHH RFYFPRPPDN

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MVLDLNVESP ADSGTSSSSV LNSADAGGFR FGLLGSPDDD DWSGEPAPAA SGFVTRQLFP  60
ASPPAPGMMM GQQAPAPPMA PVWQPRRAEE LVAAQRVAPA KKTRRGPRSR SSQYRGVTFY  120
RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GLEADINFNL SDYEEDLKQM  180
RNWTKEEFVH ILRRQSTGFA RGSSKYRGVT LHKCGRWEAR MGQLLGKKYI YLGLFDSEVE  240
AARAYDRAAI RFNGREAVTN FESSSYNGDA PPDAENEAIV DADALDLDLR MSQPTAHDPK  300
RDNIVAGLQL TFDSPESSTT MLSSQPMSSS SSQWPVHQHG TAVPPQQHQR LYPSACHGFY  360
PNVQVQVQER PMEARPPEPP SCFPGWGWQA QATPPGSSHS PLLYAAASSG FSTAAGAHPA  420
PPPPSYPDHH RFYFPRPPDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	7e-89	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG073000.4