PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG073000.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 315aa    MW: 34812.5 Da    PI: 6.794
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG073000.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.31.9e-1379129155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV+ +k  grW+A+       g    +k+++lg f+++ eAa+a+++a+ +++g
  TRIDC5BG073000.2  79 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 129
                       89********.7******...5...334336**********99**********99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
GSRTSGDCGK QVYLGGFDTA HAAARAYDRA AIKFRGLEAD INFNLSDYEE DLKQMRNWTK  60
EEFVHILRRQ STGFARGSSK YRGVTLHKCG RWEARMGQLL GKKYIYLGLF DSEVEAARAY  120
DRAAIRFNGR EAVTNFESSS YNGDAPPDAE NEAIVDADAL DLDLRMSQPT AHDPKRDNIV  180
AGLQLTFDSP ESSTTMLSSQ PMSSSSSQWP VHQHGTAVPP QQHQRLYPSA CHGFYPNVQV  240
QVQERPMEAR PPEPPSCFPG WGWQAQATPP GSSHSPLLYA AASSGFSTAA GAHPAPPPPS  300
YPDHHRFYFP RPPDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.33e-73AP2 family protein