PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG073000.17
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 328aa    MW: 36107.2 Da    PI: 6.69
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG073000.17genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-17112161155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  TRIDC5BG073000.17 112 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 161
                        78*******************......55************************998 PP
2AP242.22.1e-13204254155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 
                        s+y+GV+ +k  grW+A+       g    +k+++lg f+++ eAa+a+++a+ +++g
  TRIDC5BG073000.17 204 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 254
                        89********.7******...5...334336**********99**********99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MVLDLNVESP ADSGTSSSSV LNSADAGGFR FGLLGSPDDD DWSGEPAPAA SGFVTRQLFP  60
ASPPAPGMMM GQQAPAPPMA PVWQPRRAEE LVAAQRVAPA KKTRRGPRSR SSQYRGVTFY  120
RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GLEADINFNL SDYEEDLKQM  180
RNWTKEEFVH ILRRQSTGFA RGSSKYRGVT LHKCGRWEAR MGQLLGKKYI YLGLFDSEVE  240
AARAYDRAAI RFNGREAVTN FESSSYNGDA PPDAENEAIV DADALDLDLR MSQPTAHDPK  300
RDNIVAGLQL TFDSPESSTT MLSSQIAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.38e-91AP2 family protein