PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG073000.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 246aa    MW: 27649.4 Da    PI: 6.8743
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG073000.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.81.3e-132575155
                AP2  1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55
                       s+y+GV+ +k  grW+A+       g    +k+++lg f+++ eAa+a+++a+ +++g
  TRIDC5BG073000.11 25 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 75
                       89********.7******...5...334336**********99**********99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MRNWTKEEFV HILRRQSTGF ARGSSKYRGV TLHKCGRWEA RMGQLLGKKY IYLGLFDSEV  60
EAARAYDRAA IRFNGREAVT NFESSSYNGD APPDAENEAI VDADALDLDL RMSQPTAHDP  120
KRDNIVAGLQ LTFDSPESST TMLSSQPMSS SSSQWPVHQH GTAVPPQQHQ RLYPSACHGF  180
YPNVQVSSLR ERPLLLLVLI LCLARCSTSL LKLLLLLNNV SDETVDDISV FDKFIPDIKV  240
SMFLSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.37e-50AP2 family protein