PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG073000.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 224aa MW: 25476.4 Da PI: 8.6177

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG073000.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.9	1.1e-17	6	55	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC5BG073000.10 6 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 55 78*****************......55**********************998 PP
2	AP2	43	1.1e-13	98	148	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ +++g TRIDC5BG073000.10 98 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDRAAIRFNG 148 89******.7**...5...334336******99********99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGLEADI 60 NFNLSDYEED LKQMRNWTKE EFVHILRRQS TGFARGSSKY RGVTLHKCGR WEARMGQLLG 120 KKYIYLGLFD SEVEAARAYD RAAIRFNGRE AVTNFESSSY NGDAPPDAEN EAIVDADALD 180 LDLRMSQPTA HDPKRDNIVA GLQLTFDSPE SSTTMLSSQV KKLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-91	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG073000.10