PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG072230.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 327aa MW: 34778 Da PI: 10.5263 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.5 | 7e-18 | 104 | 153 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g++++eIrdp + +r +lg+f+taeeAa+a++aa+ ++ g TRIDC5BG072230.3 104 RYRGVRQRR-WGKFASEIRDPI----QgRRLWLGTFDTAEEAAAAYDAAKIRISG 153 69****998.**********82....36*********************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MGPNPSLDML AAAAGMESAA AAAAAEAQPR GRVVRIIVHD ADATDSSSSE DESAPPPLAT 60 MPTTKEELRR ERKKRRRVME AGRRDDSGLP HPPPSAGART PSVRYRGVRQ RRWGKFASEI 120 RDPIQGRRLW LGTFDTAEEA AAAYDAAKIR ISGSRRPADG FPFSFPPPEP AKPTVLRLPM 180 PQPAKPTILR LPMPQPAKRI TSPPPPPPPP EPAKPAISPP PLPAKPFALP LKLRLKLSFN 240 AQVKDKGWNC IAGEVKVEAG GCAGEVKVEG VGCCADESKE AGGSSEVQAV KPMWAMITGK 300 RKKRSGCGTR VGALHASSVC VEEVGGT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 69 | 77 | RRERKKRRR |
2 | 74 | 78 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03800.1 | 8e-14 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG072230.3 |