PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG067930.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 166aa MW: 18427.2 Da PI: 9.6061 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.6 | 1.1e-08 | 16 | 60 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ K + a +L + +Y+k L TRIDC5BG067930.4 16 HSIAERLRRERIAERMRALQELVPNT-----NKTDRAVMLDEILDYVKFL 60 99***********************7.....59**************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
PRPKVRARRG QATDPHSIAE RLRRERIAER MRALQELVPN TNKTDRAVML DEILDYVKFL 60 RLQVKVLSMS RLGGAGAVAQ LVSDIPLSVK GEASDGGSKQ QIWEKWSTDG TEKQVAKLMD 120 EDIGAAMQFL QSKALCMMPV SLAMAIYDTQ HSQDGQPVKP EPNNTA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 21 | 26 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02590.3 | 8e-72 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG067930.4 |