PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG067530.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 363aa MW: 41906 Da PI: 6.1292

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG067530.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.5	2.3e-13	26	102	16	98
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++p + + +++ e + +++l +++g s ++ + k++++ v+t GW++Fv +L+ gD+++Fk++g+s+f v +f+ TRIDC5BG067530.1 26 MIFPEELVLRFK--CEIPGEIKLVTRKGYSHTIVV--AKNQEKLVFTVGWRQFVGNYDLQMGDSLIFKYNGNSQF--EVIIFD 102 555666665554..346679*************..********************************9999..777776 PP
2	B3	47.9	2.3e-15	171	251	13	99
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++ +++ +f+++++g+ +++++le+++ + +++ k++++ vlt GW +Fv+ gL+ gD++vF+++g+s+f v +f+k TRIDC5BG067530.1 171 QHEMIIAEEFVRRFKGE--FPREMMLETKNRCNYIIEV--AKNKEKLVLTVGWGKFVETFGLEMGDTIVFRYNGNSQF--SVIIFDK 251 5779********988..7789***********..********************************9999..8888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
EYSYKHLDDA KKHFLVLMLG DFRDDMIFPE ELVLRFKCEI PGEIKLVTRK GYSHTIVVAK 60 NQEKLVFTVG WRQFVGNYDL QMGDSLIFKY NGNSQFEVII FDKLGREKAL SVVEDPFMPQ 120 VQERRNEAHE IGSSKKMDVP CERCNSWDEY HYTNLDDKKK YFMMLMMGDF QHEMIIAEEF 180 VRRFKGEFPR EMMLETKNRC NYIIEVAKNK EKLVLTVGWG KFVETFGLEM GDTIVFRYNG 240 NSQFSVIIFD KLGCEKALSV VPDFFPPPVK ERCTNATDTV KSSQPIQMQP FGTVNGLPVE 300 SPPTKRQRHF QMEVDESCQG KITAINISSA EPSGESFLSE DSHGACDVPD SNYFLRKKKA 360 SLS

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

EYSYKHLDDA KKHFLVLMLG DFRDDMIFPE ELVLRFKCEI PGEIKLVTRK GYSHTIVVAK  60
NQEKLVFTVG WRQFVGNYDL QMGDSLIFKY NGNSQFEVII FDKLGREKAL SVVEDPFMPQ  120
VQERRNEAHE IGSSKKMDVP CERCNSWDEY HYTNLDDKKK YFMMLMMGDF QHEMIIAEEF  180
VRRFKGEFPR EMMLETKNRC NYIIEVAKNK EKLVLTVGWG KFVETFGLEM GDTIVFRYNG  240
NSQFSVIIFD KLGCEKALSV VPDFFPPPVK ERCTNATDTV KSSQPIQMQP FGTVNGLPVE  300
SPPTKRQRHF QMEVDESCQG KITAINISSA EPSGESFLSE DSHGACDVPD SNYFLRKKKA  360
SLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	6e-14	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG067530.1