PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG067470.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 350aa MW: 40410.2 Da PI: 7.2904

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG067470.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.1	5e-16	42	121	14	99
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + +++p + +++ +g+ + +++le+++g s ++ + k++++ vlt GW++F + +L+ gD+++F+++g+s+f +v++f+k TRIDC5BG067470.3 42 DAMIIPQEVVRRLKGE--IPGEIKLETRNGYSHTIVV--AKNQEKLVLTVGWRQFIENYDLQIGDSLMFRYKGNSQF--NVMIFDK 121 5699*****99777..5568***********..******************************9*..9999986 PP
2	B3	36.3	1e-11	187	268	11	98
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ +++p f+++++ e +++++le+++ s+ + + k+ g vlt GW +Fv gL+ gD++v++++g+s+f +v +f+ TRIDC5BG067470.3 187 DFQHEMIIPEVFVQRFK--CEFPREMILETQNCHSYVIGV--AKNNGNLVLTVGWGKFVGIFGLEMGDTIVLRYIGNSRF--NVIIFD 268 55678******9997..458889***********..********************************9999..887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
RGAAKRMGTS FGSSKLQDEQ YYKHLDDERK YFLVLMLGDF QDAMIIPQEV VRRLKGEIPG 60 EIKLETRNGY SHTIVVAKNQ EKLVLTVGWR QFIENYDLQI GDSLMFRYKG NSQFNVMIFD 120 KLGREKALSV VLDPFLHRVQ DRRNEAHEIG SSQKMDVPWE RCKSRTEYHY ANLDDEKKYF 180 LVHMMGDFQH EMIIPEVFVQ RFKCEFPREM ILETQNCHSY VIGVAKNNGN LVLTVGWGKF 240 VGIFGLEMGD TIVLRYIGNS RFNVIIFDEL GCEKVSSVFV DPSPPPVQER RTSATDTVKS 300 SHFRPQAIQT QAFSIRKEMP MESRHLQMET DKSCQDKNTV ISTSSCESSG

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

RGAAKRMGTS FGSSKLQDEQ YYKHLDDERK YFLVLMLGDF QDAMIIPQEV VRRLKGEIPG  60
EIKLETRNGY SHTIVVAKNQ EKLVLTVGWR QFIENYDLQI GDSLMFRYKG NSQFNVMIFD  120
KLGREKALSV VLDPFLHRVQ DRRNEAHEIG SSQKMDVPWE RCKSRTEYHY ANLDDEKKYF  180
LVHMMGDFQH EMIIPEVFVQ RFKCEFPREM ILETQNCHSY VIGVAKNNGN LVLTVGWGKF  240
VGIFGLEMGD TIVLRYIGNS RFNVIIFDEL GCEKVSSVFV DPSPPPVQER RTSATDTVKS  300
SHFRPQAIQT QAFSIRKEMP MESRHLQMET DKSCQDKNTV ISTSSCESSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	5e-13	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG067470.3