PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5BG067470.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 195aa MW: 22459.6 Da PI: 6.2391 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38 | 3e-12 | 33 | 114 | 11 | 98 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ +++p f+++++ e +++++le+++ s+ + + k+ g vlt GW +Fv gL+ gD++v++++g+s+f +v +f+ TRIDC5BG067470.2 33 DFQHEMIIPEVFVQRFK--CEFPREMILETQNCHSYVIGV--AKNNGNLVLTVGWGKFVGIFGLEMGDTIVLRYIGNSRF--NVIIFD 114 55688********9997..458889***************..**********************************9999..887776 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 195 aa Download sequence |
MDVPWERCKS RTEYHYANLD DEKKYFLVHM MGDFQHEMII PEVFVQRFKC EFPREMILET 60 QNCHSYVIGV AKNNGNLVLT VGWGKFVGIF GLEMGDTIVL RYIGNSRFNV IIFDELGCEK 120 VSSVFVDPSP PPVQERRTSA TDTVKSSHFR PQAIQTQAFS IRKEMPMESR HLQMETDKSC 180 QDKNTVISTS SCESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66980.1 | 7e-11 | B3 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5BG067470.2 |