PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG065540.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 20756.4 Da PI: 11.3124 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.4 | 1.7e-18 | 97 | 146 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g++ AeIrdp + kr +lg+f+taeeAa+ ++ a+ +l+g TRIDC5BG065540.1 97 RFRGVRQRP-WGKYSAEIRDP-----SlqKRLWLGTFDTAEEAAAVYDDAAVRLKG 146 69*******.**********9.....445***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MGMSPADSLA AGRTRRAGSL APLPKRVCVF FVDADATESE SSGDEEVRRG KRRVRKVIDI 60 SVKASSQPSP ASSIPRRRAL LLRRRAAKAG DGGYRRRFRG VRQRPWGKYS AEIRDPSLQK 120 RLWLGTFDTA EEAAAVYDDA AVRLKGSHAV TNFSSSSSSD SDYVASNKPR SPPPAKLRPT 180 GEAAAEATAT VP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 48 | 56 | RRGKRRVRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03800.1 | 2e-08 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG065540.1 |