PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG058290.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 97aa    MW: 11203.8 Da    PI: 10.4695
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG058290.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY128.21.1e-39772102170
             YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                       +++++e++ ++ p    PekrqrvPsaynrfikeei+rik++nPdishreafs+aaknWahfP+ihfgl
  TRIDC5BG058290.4   7 TKSDQEHMLHMRP---APEKRQRVPSAYNRFIKEEIRRIKTNNPDISHREAFSTAAKNWAHFPNIHFGL 72 
                       4566777777655...6**************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MPMMFSTKSD QEHMLHMRPA PEKRQRVPSA YNRFIKEEIR RIKTNNPDIS HREAFSTAAK  60
NWAHFPNIHF GLGSNESSKK LDEAIAAPIP QKVQGLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.13e-35YABBY family protein