PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG056870.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 355aa MW: 37478.6 Da PI: 6.9256

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG056870.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.5	3.1e-12	30	114	1	70
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...............rergferspkqCkekwenlnkrykkikegekk 70 +W+++ + L+ea++ ++ +r+klk +W +++ + +++g ++p+qCk+k e+++kry+++ + + + TRIDC5BG056870.2 30 EWSESGISRLLEAYEAKWLLRNRAKLKWSDWVDIAHDVsahcsssdhaskpgaAAGGTAKTPNQCKNKVESMKKRYRAESAAATR 114 5****************************************************************************99877665 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
SGCSAAASMD GLPDAAPPAP APQQQPKRDE WSESGISRLL EAYEAKWLLR NRAKLKWSDW 60 VDIAHDVSAH CSSSDHASKP GAAAGGTAKT PNQCKNKVES MKKRYRAESA AATRAGVAGA 120 ASASGGPSWR FFGRMDGLLK GPAAGCSGQP QAQPEPSNDG IVQPRAPLKA EPAADAEADT 180 ALQQPPDTAG PPGALSELLN ADANGSATVK AEKTVDQATH KETSRAADSD AANVSSPRSK 240 EVEAEANDDG AEEAWDAPGR KRKGPELDVA RSIELLASSF VKIERARLEV YRDTERMRAE 300 AEVKRGEMEL RRTEIMAKTQ LQIARLFAKR LKECVGGNGG SSSQVDTLAK KGENG

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

SGCSAAASMD GLPDAAPPAP APQQQPKRDE WSESGISRLL EAYEAKWLLR NRAKLKWSDW  60
VDIAHDVSAH CSSSDHASKP GAAAGGTAKT PNQCKNKVES MKKRYRAESA AATRAGVAGA  120
ASASGGPSWR FFGRMDGLLK GPAAGCSGQP QAQPEPSNDG IVQPRAPLKA EPAADAEADT  180
ALQQPPDTAG PPGALSELLN ADANGSATVK AEKTVDQATH KETSRAADSD AANVSSPRSK  240
EVEAEANDDG AEEAWDAPGR KRKGPELDVA RSIELLASSF VKIERARLEV YRDTERMRAE  300
AEVKRGEMEL RRTEIMAKTQ LQIARLFAKR LKECVGGNGG SSSQVDTLAK KGENG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	2e-39	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG056870.2