PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG056870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 90aa MW: 9747.88 Da PI: 8.243 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 25.9 | 2.6e-08 | 22 | 89 | 1 | 53 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...............rergferspkqCkek 53 +W+++ + L+ea++ ++ +r+klk +W +++ + +++g ++p+qCk+k TRIDC5BG056870.1 22 EWSESGISRLLEAYEAKWLLRNRAKLKWSDWVDIAHDVsahcsssdhaskpgaAAGGTAKTPNQCKNK 89 5*****************************************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 90 aa Download sequence |
MDGLPDAAPP APAPQQQPKR DEWSESGISR LLEAYEAKWL LRNRAKLKWS DWVDIAHDVS 60 AHCSSSDHAS KPGAAAGGTA KTPNQCKNKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54390.1 | 4e-17 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG056870.1 |