PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG051160.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 269aa    MW: 29746.4 Da    PI: 4.8433
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG051160.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.62.4e-121462148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT+eEd +l   +    g+ +W+++++  g+ R++k+c++rw +yl
  TRIDC5BG051160.2 14 RGPWTAEEDRKLMAFILGNAGRcCWRAVPKLAGLLRCGKSCRLRWTNYL 62
                      89*************99998889**********99************97 PP
2Myb_DNA-binding54.42.9e-1771112447
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        T +E+ l vd++++lG++ W++Ia++++ gRt++++k++w+++
  TRIDC5BG051160.2  71 LTDDEERLVVDLHAKLGNR-WSKIAAKLP-GRTDNEIKNHWNTH 112
                       699****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MGRQPCCDKL GVKRGPWTAE EDRKLMAFIL GNAGRCCWRA VPKLAGLLRC GKSCRLRWTN  60
YLRPDLKRGL LTDDEERLVV DLHAKLGNRW SKIAAKLPGR TDNEIKNHWN THIKKKLIKM  120
GIDPITHEPL EVRKQPQQAS LSTTSAQSST ITIEDKDASS VGSESSPPEL SGANTDNTTG  180
GTNGIHDQDP LVKWLLEDED DLPTIGIVEE PWLDFTVEND VDKFNSIPSA MSWDIGATDW  240
LLDYQDFGAG DSSLLDDASM VDSSSGSNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.15e-81MYB family protein