PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG051160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 242aa MW: 26727.6 Da PI: 4.6335 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.6 | 2.5e-17 | 26 | 67 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T +E+ l vd++++lG++ W++Ia++++ gRt++++k++w+++ TRIDC5BG051160.1 26 LTDDEERLVVDLHAKLGNR-WSKIAAKLP-GRTDNEIKNHWNTH 67 699****************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
GLLRCGKSCR LRWTNYLRPD LKRGLLTDDE ERLVVDLHAK LGNRWSKIAA KLPGRTDNEI 60 KNHWNTHIKK KLIKMGIDPI THEPLEVRKQ PQQASLSTTS AQSSTITIEC KSNNGGKSQQ 120 QDTHINRDKD ASSVGSESSP PELSGANTDN TTGGTNGIHD QDPLVKWLLE DEDDLPTIGI 180 VEEPWLDFTV ENDVDKFNSI PSAMSWDIGA TDWLLDYQDF GAGDSSLLDD ASMVDSSSGS 240 NL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66230.1 | 9e-51 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG051160.1 |