PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG050400.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 307aa MW: 32603.5 Da PI: 6.7855

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG050400.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.2	5e-22	123	178	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe++F+++++p++++r eL+++l+L+ rqVk+WFqNrR+++k TRIDC5BG050400.10 123 KKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMK 178 688999***********************************************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MSFGGMFDGA GSGVFSYDAG GGGPGMHNPG RLLAPPPIPR PGAGAGGGGF ASSTGLSLGL 60 QTNMEGGGQL GGAFMGSTGS GGDGDSLGRA REDENDSRSG SDNLDGASAD ELDPDNSNPR 120 KKKKRYHRHT PQQIQELEAV FKECPHPDEK QRMELSRRLN LESRQVKFWF QNRRTQMKTQ 180 IERHENALLR QENDKLRTEN MTIREAMRSP TCGNCGGAAV LGEVSLEEQH LRIENSRLKD 240 ELDRVCALAG KFLGRPVSAI SSPLSLPSSL CSGLDLAVGS NNGFMGMGMQ SIPDLMGGGS 300 AAMRLPA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	120	125	RKKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00730.2	2e-89	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG050400.10