PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG050070.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 265aa MW: 28694.2 Da PI: 8.6448 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 4.8e-17 | 41 | 92 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ + g+Wv+e+r+p g k r +lg+f tae+Aa+a++aa ++l g TRIDC5BG050070.2 41 LYRGVRRRGRVGQWVCEVRVP---GiKGSRLWLGTFNTAEMAARAHDAAVLALSG 92 69******************9...8777*********************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MDVADIASRS GQQEQGHRTV SSEPPKRPAG RTKFHETRHP LYRGVRRRGR VGQWVCEVRV 60 PGIKGSRLWL GTFNTAEMAA RAHDAAVLAL SGRAACLNFA DSAWRMLPVL AAGSFGFDSA 120 REIKAAVAVA VVAFQRKQII PVAVAVVALQ QQQVPVAVAV VALQQKQVPL AVAVVALQQL 180 QVPVAVAVVA LQQQQQIILP VACLAPEFYM SSVDLLELDE EQWFGGMEAG SYYASLAQGM 240 LVAPPDERAR PEHGVQTPLW SCLFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 2e-25 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG050070.2 |