PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG050040.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 26039 Da PI: 5.3508 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.8 | 8.7e-16 | 48 | 100 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ rWv+e+r+p g + r +lg++ tae Aa+a++aa+++l g TRIDC5BG050040.2 48 PVYRGVRRRGGACRWVCEVRVP---GrRGCRLWLGTYVTAESAARAHDAAMLALGG 100 68*******************9...6445***********************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
VDRQQCKMEM GSERWTSPST PTSSRDQHAA APAKRPAGRT KFKETRHPVY RGVRRRGGAC 60 RWVCEVRVPG RRGCRLWLGT YVTAESAARA HDAAMLALGG RSAACLNFPD SAWLLAVPSA 120 LADLADVRRA ALAAIAGFQR RETASCAATV PVDEVFDTSS SSSSGSWATP QPCAAADGVF 180 DVPAAALASG DMFDLELDMA GEMDLGYYYA DFAEGLLFEP PPPADDTEAW WQNGHYYDGN 240 GGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 2e-26 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG050040.2 |