PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG050040.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 232aa    MW: 24608.8 Da    PI: 8.4115
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG050040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.98e-1652104155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++    rWv+e+r+p   g +  r +lg++ tae Aa+a++aa+++l g
  TRIDC5BG050040.1  52 PVYRGVRRRGGACRWVCEVRVP---GrRGCRLWLGTYVTAESAARAHDAAMLALGG 104
                       68*******************9...6445***********************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
HRSPVDRQQC KMEMGSERWT SPSTPTSSRD QHAAAPAKRP AGRTKFKETR HPVYRGVRRR  60
GGACRWVCEV RVPGRRGCRL WLGTYVTAES AARAHDAAML ALGGRSAACL NFPDSAWLLA  120
VPSALADLAD VRRAALAAIA GFQRRETASC AATVPVDEVF DTSSSSSSGS WATPQPCAAA  180
DGVFDVPAAA LASDMFDFEL DVSWVMDMGS RATSQPGCAD KVLEVPAAAL GG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.12e-26ERF family protein