PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG047860.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 275aa MW: 29978.5 Da PI: 6.1701 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.4 | 1.4e-09 | 112 | 159 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ Er RR+ri +++ L++l+P + +k Ka iL + ++Y++sLq TRIDC5BG047860.1 112 SHSLSERVRRERISERMRMLQSLVPGC----DKVTGKALILDEIINYVQSLQ 159 799***********************9....555*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MAGFSHLPQQ MEYGLTNAGS FLLCHGNPED AAASLEGSSG VLDTPLVATA SVEKKRKPKE 60 DTASLNSAHS KETKESTRKR GGKKQGKEVD EEEEEPKGYI HVRARRGQAT DSHSLSERVR 120 RERISERMRM LQSLVPGCDK VTGKALILDE IINYVQSLQN QVEFLSMRIA SLSPVVYGFG 180 MESGAALSDQ SQIEGMFHEA AALPTGPPMN RSSSPAPSQA MMDTGTSSSS PPYSLQGTQD 240 NGSSSSSYMM QTVGEPRHEL FNQVMFSNYM CSFQQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 54 | 87 | KKRKPKEDTASLNSAHSKETKESTRKRGGKKQGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 3e-34 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG047860.1 |