PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5BG047620.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 222aa MW: 24396.4 Da PI: 10.018 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 110.2 | 2.3e-34 | 16 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppGfrFhPtd el+ +yL++ + +++l++ vi+ v d +PwdLp + +e ++ yfFs+r+ +g r++rat gyWkatgk+k+v TRIDC5BG047620.2 16 LPPGFRFHPTDVELLLQYLRRMALDRPLPA-AVIPVVhDAAMPDPWDLPGA--SEGESAYFFSQRQG---RGGRRRRATG-GYWKATGKEKPV 101 79****************************.88999989999*******43..466889****9976...5889999977.************ PP NAM 93 lsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ k+ lvg+k+ L+f++g++ +tdWvmheyrl TRIDC5BG047620.2 102 FVQlpvgKRLLVGVKTALAFHRGKS----RTDWVMHEYRL 137 **999977778**********6544....79*******98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 222 aa Download sequence |
MEKMRAAGEA PPTQLLPPGF RFHPTDVELL LQYLRRMALD RPLPAAVIPV VHDAAMPDPW 60 DLPGASEGES AYFFSQRQGR GGRRRRATGG YWKATGKEKP VFVQLPVGKR LLVGVKTALA 120 FHRGKSRTDW VMHEYRLAGA ADQNKRANGG SQSSEWVVCR VSMKSRARRS AAGGETTGDH 180 QQEQPSPSPS STSSCVTDHT CHAPDQEEVS SSTSHCQQHP TR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G33480.1 | 2e-39 | NAC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5BG047620.2 |