PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG044080.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 579aa MW: 61132.3 Da PI: 10.0798

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG044080.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.7	2.3e-07	21	72	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqky 47 W t E++ll+ av ++G+ +W+++a +++ g+t+ +c++r++++ TRIDC5BG044080.2 21 WGTLEELLLAFAVCRHGTASWDSVATEVQarsplaarPGLTPGSCRLRFHQL 72 9999*********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
GLGRMAGGSD GPDVPAGGEI WGTLEELLLA FAVCRHGTAS WDSVATEVQA RSPLAARPGL 60 TPGSCRLRFH QLHRRFSAGG GAEEEEQEEG EVGPEAEASA ADGWLDELRR LRVAELRREV 120 ERCDLSIGTL QSKVELMKEE RERSLSSGEG KPEGVTGDEN VSSEEPGRSC RESNSTDLKR 180 PGAAKAAEEA AKEELSGESK ESAVSLQCRR RKASAEEEAD EPLAALLDRV AARFGPVFDQ 240 LQESQESESY RGTIRRHVDL EAMRRKLDGA AGYASSAELY RDLLLLCANA AVYLPRHAPD 300 HAAAALNALR LVSAQVSASL REPSTTTQPP TNGANPPPAP AVGPDSRRAE ADIVGPLIQK 360 AAKPLIFCRK RSSIAKAAAA AAVARKEEAV EKRDVEEEAE SDGEKKAALA AAAKGKAWGT 420 GTKKTRGPGK NSALSRKKAA AAAEEAAAAA AEKKENGDSD GAAAGGLPKK RIAVDFLKRL 480 NQGKSSPPKK RGSPLTKRKR SAPAPEEEEE EQPKARRGPG RKNTGRGGSK AGGKAAATKK 540 SVGRPQKRGA APATPPPAKR AKVNRSERSS SSSRRGGRK

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

GLGRMAGGSD GPDVPAGGEI WGTLEELLLA FAVCRHGTAS WDSVATEVQA RSPLAARPGL  60
TPGSCRLRFH QLHRRFSAGG GAEEEEQEEG EVGPEAEASA ADGWLDELRR LRVAELRREV  120
ERCDLSIGTL QSKVELMKEE RERSLSSGEG KPEGVTGDEN VSSEEPGRSC RESNSTDLKR  180
PGAAKAAEEA AKEELSGESK ESAVSLQCRR RKASAEEEAD EPLAALLDRV AARFGPVFDQ  240
LQESQESESY RGTIRRHVDL EAMRRKLDGA AGYASSAELY RDLLLLCANA AVYLPRHAPD  300
HAAAALNALR LVSAQVSASL REPSTTTQPP TNGANPPPAP AVGPDSRRAE ADIVGPLIQK  360
AAKPLIFCRK RSSIAKAAAA AAVARKEEAV EKRDVEEEAE SDGEKKAALA AAAKGKAWGT  420
GTKKTRGPGK NSALSRKKAA AAAEEAAAAA AEKKENGDSD GAAAGGLPKK RIAVDFLKRL  480
NQGKSSPPKK RGSPLTKRKR SAPAPEEEEE EQPKARRGPG RKNTGRGGSK AGGKAAATKK  540
SVGRPQKRGA APATPPPAKR AKVNRSERSS SSSRRGGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60110.1	3e-14	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG044080.2