PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG042760.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 391aa MW: 42891.8 Da PI: 9.6903

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG042760.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.1	3.8e-33	225	283	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++d k v++tYeg+Hnhe TRIDC5BG042760.8 225 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHQGCSVRKHVERASHDLKSVITTYEGKHNHE 283 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MLWHSLLQPL ANCSLLQRLT QQCHQIARSV TMFSPSNPTL AQQVTQMWKR VTMFATKTSR 60 CQIFISRDPV FSQALLQPRT VPTKQSLNRR HLTLCSVIIT LLKNRKMTRE TKMKIQDMQG 120 VEGRPAAGPP VSAYGDTSIM ESQDAADVSS TLSNEIDRAT QGTISLDCDV GEDETESKRR 180 KLDALAAVTI PTATTTSSID MVAAASRAVR EPRVVVQTTS EVDILDDGYR WRKYGQKVVK 240 GNPNPRSYYK CTHQGCSVRK HVERASHDLK SVITTYEGKH NHEVPAARNS GNAGSAPASA 300 PQANLSHHRQ EQAQGSYSQF GGASPFGSFG LPPRGHLGAA GNFHFGMAPP GMSMPPMPAA 360 RHPSMMQGYP GLMMQEGQMM QEGQMKAEPD Q

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MLWHSLLQPL ANCSLLQRLT QQCHQIARSV TMFSPSNPTL AQQVTQMWKR VTMFATKTSR  60
CQIFISRDPV FSQALLQPRT VPTKQSLNRR HLTLCSVIIT LLKNRKMTRE TKMKIQDMQG  120
VEGRPAAGPP VSAYGDTSIM ESQDAADVSS TLSNEIDRAT QGTISLDCDV GEDETESKRR  180
KLDALAAVTI PTATTTSSID MVAAASRAVR EPRVVVQTTS EVDILDDGYR WRKYGQKVVK  240
GNPNPRSYYK CTHQGCSVRK HVERASHDLK SVITTYEGKH NHEVPAARNS GNAGSAPASA  300
PQANLSHHRQ EQAQGSYSQF GGASPFGSFG LPPRGHLGAA GNFHFGMAPP GMSMPPMPAA  360
RHPSMMQGYP GLMMQEGQMM QEGQMKAEPD Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-53	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG042760.8