PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG038260.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 89aa    MW: 10206.7 Da    PI: 10.1161
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG038260.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding513.4e-162671148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg++  +E++l+v++ ++lG++ W++Ia++++  Rt++++k++w+++l
  TRIDC5BG038260.5 26 RGNFNDQEEKLIVHLQALLGNR-WAAIASYLP-ERTDNDIKNYWNTHL 71
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
CVAGLMRCSK SCRLRWTNYL RPGIKRGNFN DQEEKLIVHL QALLGNRWAA IASYLPERTD  60
NDIKNYWNTH LKKKLKKMQD AGGNDGGSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62470.22e-49MYB family protein