PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG038260.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 317aa    MW: 33205.1 Da    PI: 7.503
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG038260.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.84.4e-171461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd+ lv +++++G+g+W++++   g+ R+ k+c++rw +yl
  TRIDC5BG038260.2 14 KGPWTPEEDLMLVSYIQEHGPGNWRAVPTNTGLMRCSKSCRLRWTNYL 61
                      79********************************************97 PP
2Myb_DNA-binding47.64e-1567112148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++  +E++l+v++ ++lG++ W++Ia++++  Rt++++k++w+++l
  TRIDC5BG038260.2  67 RGNFNDQEEKLIVHLQALLGNR-WAAIASYLP-ERTDNDIKNYWNTHL 112
                       899*******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MGRPPCCDKV GVKKGPWTPE EDLMLVSYIQ EHGPGNWRAV PTNTGLMRCS KSCRLRWTNY  60
LRPGIKRGNF NDQEEKLIVH LQALLGNRWA AIASYLPERT DNDIKNYWNT HLKKKLKKMQ  120
DAGGNDGGSE GAGAAGVGGG VAKAAAPKGQ WERRLQTDIH TARQALRDAL SLEPSQPAAL  180
AAPALPTPPG SVTTYASSAD NIARLLEGWM RPGSSSKGPE ASGSTSSTTA TTRQQPQCSW  240
DGAASASASH SGGAAGAAAA QTPEGSTETS KLAGAGAGGA PPAFSMLENW LLDDGMGHGE  300
AGLMDDVVPL GDPSEFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.17e-90MYB family protein