PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG037970.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 465aa MW: 47012.7 Da PI: 6.7978

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG037970.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.6	3.4e-11	252	300	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a ++ +Ka++L + ++Y+k Lq TRIDC5BG037970.2 252 HSIAERLRRERIAERMKALQELVPNA--NKWLQTDKASMLDEIIDYVKFLQ 300 99*********************7..48888***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MQPTTREMQA MAAAGQISLD DLRSGHAGVN NGGAGGVHDD FLDQMFGSLP PSAWHDLAAG 60 TKPEDGAQAD GMQQQLFGGP YDDSVMLASR LRQHQISGGP GGGAASAKQM VLRQLADLRQ 120 GHHNNMLLQG MGRSPSIGGG GGEGGLLLPL TLGNGGSGGD VQALLKAAAN SAGGDAGVFG 180 GFAGSLQQQQ HFQPHPQQQT APMPSQTFGG VGGAPGGGAQ PQQQAGGGGG GGAPAPPRQR 240 VRARRGQATD PHSIAERLRR ERIAERMKAL QELVPNANKW LQTDKASMLD EIIDYVKFLQ 300 LQVKTSMPTH TQVLSMSRLG GAAAVAPLVA DMSSEGRGGA AGGAADGSDG LTVTEQQVAK 360 LMEEDMGAAM QYLQGKGLCL MPVSLASAIS SATCQLRPPA AAAGGPFTAA QHMSAAMRMS 420 VGDGGVPASP SMSVLTAQSA MANGGACAND GEGSHPKDAA SVSKP

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MQPTTREMQA MAAAGQISLD DLRSGHAGVN NGGAGGVHDD FLDQMFGSLP PSAWHDLAAG  60
TKPEDGAQAD GMQQQLFGGP YDDSVMLASR LRQHQISGGP GGGAASAKQM VLRQLADLRQ  120
GHHNNMLLQG MGRSPSIGGG GGEGGLLLPL TLGNGGSGGD VQALLKAAAN SAGGDAGVFG  180
GFAGSLQQQQ HFQPHPQQQT APMPSQTFGG VGGAPGGGAQ PQQQAGGGGG GGAPAPPRQR  240
VRARRGQATD PHSIAERLRR ERIAERMKAL QELVPNANKW LQTDKASMLD EIIDYVKFLQ  300
LQVKTSMPTH TQVLSMSRLG GAAAVAPLVA DMSSEGRGGA AGGAADGSDG LTVTEQQVAK  360
LMEEDMGAAM QYLQGKGLCL MPVSLASAIS SATCQLRPPA AAAGGPFTAA QHMSAAMRMS  420
VGDGGVPASP SMSVLTAQSA MANGGACAND GEGSHPKDAA SVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	257	262	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	6e-42	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG037970.2