PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG034820.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 214aa    MW: 23289.9 Da    PI: 4.3207
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG034820.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.27.9e-18343547
                      -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      + eE++  +d+++qlG++ W++Ia++++ gRt++++k++w+++
  TRIDC5BG034820.4  3 SDEEEKTVIDLHEQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 43
                      78****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
LLSDEEEKTV IDLHEQLGNR WSKIASHLPG RTDNEIKNHW NTHIKKKLRK MGIDPATHKP  60
LQPAAVATYQ HPQRPTGGES PEQKVPAAAA TGSQSGAEED MFCPDEVPTM MQLLDNIILP  120
CDVVEPAPLD SSCGTASSPA ESSSSSSSAS AASSGGGGFE DDWLPKIMEW PVEPMFMMGL  180
DVDVVTGPTS AWEFEDAFNA YQRIALFDHQ ETWA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.18e-35MYB family protein