PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG034650.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 344aa MW: 35671.5 Da PI: 7.8986

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG034650.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.3	3e-32	151	204	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ TRIDC5BG034650.3 151 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 204 9****************************************************7 PP
2	Myb_DNA-binding	47	5.9e-15	152	203	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ TRIDC5BG034650.3 152 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 203 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
GVGGASAAPP IRGIPIYNGA GGFPFLPPAP GGGEGHHLPK VGFYSYHHPA AWPSSLGSTS 60 PSSLGPGPAP PANSFDPTAA FLSSAAHHRM LSASGRLNGM LSDTLRSYGA PGGGVGMGLG 120 GHHHHLHGAQ PFGLGSRFMP KLPAKRSMRA PRMRWTSTLH ARFVHAVELL GGHERATPKS 180 VLELMDVKDL TLAHVKSHLQ MYRTVKSTDK PAASGPTDGG SGDDDFPSAG GQAGSGGDNN 240 MCPRPFPEHR STSEGTASSV GGGGDMDQSS AGNASTKWSN SSRDPWVSSN SCNMDAHRSI 300 GLSSPMENME PCRSTGSQVS NHELSSPSLE FTLGRPDWHG ADHD

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

GVGGASAAPP IRGIPIYNGA GGFPFLPPAP GGGEGHHLPK VGFYSYHHPA AWPSSLGSTS  60
PSSLGPGPAP PANSFDPTAA FLSSAAHHRM LSASGRLNGM LSDTLRSYGA PGGGVGMGLG  120
GHHHHLHGAQ PFGLGSRFMP KLPAKRSMRA PRMRWTSTLH ARFVHAVELL GGHERATPKS  180
VLELMDVKDL TLAHVKSHLQ MYRTVKSTDK PAASGPTDGG SGDDDFPSAG GQAGSGGDNN  240
MCPRPFPEHR STSEGTASSV GGGGDMDQSS AGNASTKWSN SSRDPWVSSN SCNMDAHRSI  300
GLSSPMENME PCRSTGSQVS NHELSSPSLE FTLGRPDWHG ADHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-54	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG034650.3