PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG031800.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 373aa MW: 39883.4 Da PI: 6.8283

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG031800.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	85.8	3.9e-27	152	211	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 dDg++WrKYGqK++ g+++pr+YYrCt++ gC ++k+v+r++edp +++++Y+geH++ TRIDC5BG031800.1 152 DDGHSWRKYGQKDILGAQHPRAYYRCTYQktqGCAATKQVQRADEDPALFDVIYHGEHTC 211 8*************************98999***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
RSYISCLALR NQIGILSRRE RNSEQREMEA VHEGNGGGSG LVVTELSHIK ELVKQLDVHL 60 GGSPDLCKLL AQQIFAVTER SIGMIKSGHF NGPKRSAAGA GLDSPPLSAT PSPVSGVSNT 120 PFKPNKKRKT SEKGRHQIRV SSAAGGADAP ADDGHSWRKY GQKDILGAQH PRAYYRCTYQ 180 KTQGCAATKQ VQRADEDPAL FDVIYHGEHT CVHKTAAAAG MVQPAGQNPD AQSLLQSLSS 240 SLTVKTEGLT AAGTQGWSTT TPFSFSSPAV SGMTPAQHHP FSTPSTPENC FVSMPTSLEP 300 SPATSGSNHM CMTPFHVHSE LQTMVSALVE ATSMPAADTE EAAFSYWGFD DSALHVNNLD 360 EDVNNFDIST FFA

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

RSYISCLALR NQIGILSRRE RNSEQREMEA VHEGNGGGSG LVVTELSHIK ELVKQLDVHL  60
GGSPDLCKLL AQQIFAVTER SIGMIKSGHF NGPKRSAAGA GLDSPPLSAT PSPVSGVSNT  120
PFKPNKKRKT SEKGRHQIRV SSAAGGADAP ADDGHSWRKY GQKDILGAQH PRAYYRCTYQ  180
KTQGCAATKQ VQRADEDPAL FDVIYHGEHT CVHKTAAAAG MVQPAGQNPD AQSLLQSLSS  240
SLTVKTEGLT AAGTQGWSTT TPFSFSSPAV SGMTPAQHHP FSTPSTPENC FVSMPTSLEP  300
SPATSGSNHM CMTPFHVHSE LQTMVSALVE ATSMPAADTE EAAFSYWGFD DSALHVNNLD  360
EDVNNFDIST FFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46400.1	3e-30	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG031800.1