PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG031060.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 309aa    MW: 34211.5 Da    PI: 4.5755
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG031060.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.88.8e-1673123155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GVr ++ +g+W+AeIrdp+    + +r ++g+f ++e Aa+a++a r++ + 
  TRIDC5BG031060.4  73 SKYPGVRLRS-WGKWAAEIRDPV----SkTRKWIGTFTSEEAAAAAYEAERNRVRT 123
                       89*****998.**********64....44**********88999999998988775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MMVPCSRKVR ISCCDPDATD SSDEDDRHAK KEKRMTMEVL VPVKTSGPLK SRKTLVPCGT  60
KKSMGTEKKQ PTSKYPGVRL RSWGKWAAEI RDPVSKTRKW IGTFTSEEAA AAAYEAERNR  120
VRTEMLAIKS RSPPSEHEAV SSEATVSCVS SSVSSGDQKA QEVHKLASME IDPDTADESL  180
LHCSPEPLGK EIQVDAFLGR MNVDESLVHC SSTPSDEEIP VDAFRSQMNE LPIGDYVCAT  240
DKLSLDDISR LADMFPVNDF VDTTGEPPGD DYIGLADISH LPMPMFELDA ELNWEGFDFA  300
SMERELEKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.18e-12ERF family protein