PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG027470.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 140aa    MW: 15649.8 Da    PI: 10.1595
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG027470.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.57.3e-21666257
                      T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++R+++t+eql +Lee++++  r+p+a e+++++++l    +++ ++V++WFqN++a+e++
  TRIDC5BG027470.2  6 STRWCPTPEQLMILEEMYRSgVRTPNAVEIQQITAHLayygRIEGKNVFYWFQNHKARERQ 66
                      58*****************99**************************************97 PP
2Wus_type_Homeobox121.92.6e-39567264
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       ++tRW+PtpeQ++iLee+y+sG+rtPn+ eiq+ita+L+ yG+ie+kNVfyWFQN+kaRerq+
   TRIDC5BG027470.2  5 PSTRWCPTPEQLMILEEMYRSGVRTPNAVEIQQITAHLAYYGRIEGKNVFYWFQNHKARERQR 67
                       689***********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MPQTPSTRWC PTPEQLMILE EMYRSGVRTP NAVEIQQITA HLAYYGRIEG KNVFYWFQNH  60
KARERQRLRR RLCARHQQPS SPAAPPPPPP HTGAAGGGGN AAGAGAGVNA MHPAVMQLHH  120
HHHTYATSCF MAPQSWNIHM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.11e-36WOX family protein