PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG023800.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 726aa MW: 80618.7 Da PI: 6.4331

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG023800.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.3	5.8e-14	181	259	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+++ + g +++ +C ++gk++ k+ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5BG023800.1 181 DFYNLYSWEMGFGIRYGKSRRNAKGG-KCMQEITCVNSGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 259 6*******************8888.66789******98877..........9***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
MEFSVEEEPR SGSPLALGLG EDAMEAVRRA FPGQDFAIDV VNRAFGRRNP EERSQQDSSA 60 CGISGACTSE KPVDLKQAEN AGKSCAQQDP SASEMQLRSQ EAEQAGQRCD APPAPADVGA 120 EAGGGWNRRV RRGRIPDERE PDAQRVSALE KALTGFAERQ TDVVVNPTVG TCFDSITEAY 180 DFYNLYSWEM GFGIRYGKSR RNAKGGKCMQ EITCVNSGKP NMGGKSRRCE CTALIRLLRT 240 DDNGWYVTQH RKVHNHAFST TYGNKVHWPS HKHLDKYTRD LVRQLRHNNV NLGVYDTIAS 300 FFGRMENVPF SKRSIRTLCG EVIREQADGD ARKTMETAVA SGERPENHTG EETTFNCLDL 360 ASTTLGSPNT PVDPLRYPEQ DDPHSNAEAG RLADLLLAFG DCHLVLKSCT YDDLINSNGT 420 MSGLEEAVKA VTPHRQQGIF GDLWSRAHNS GGVVSAQVLT IKDLFRFTRW LTTTTGQHNL 480 RCVQQRVKLV NSGKAVLEPE QIALLHLYQA ENDEYSVKMN KLQGERDAKI AHYMAKIDEA 540 RKSFEVSIQA AKQHYPVSAS YVALDSNELR GQCWTMYLAQ CRKEAKDLNA KASNIVEKYG 600 PEVIQRHLFE FCSQETNRQA LLKYAQTKVN KLKEAGGARE DTLHDYMTLL EIEKAYALLA 660 AEEQIANGPD TCGGSEDADH GNRNNTIARG EAAEGARGDG HDGGEGASEG PPRQKRQRND 720 QDYVWW

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

MEFSVEEEPR SGSPLALGLG EDAMEAVRRA FPGQDFAIDV VNRAFGRRNP EERSQQDSSA  60
CGISGACTSE KPVDLKQAEN AGKSCAQQDP SASEMQLRSQ EAEQAGQRCD APPAPADVGA  120
EAGGGWNRRV RRGRIPDERE PDAQRVSALE KALTGFAERQ TDVVVNPTVG TCFDSITEAY  180
DFYNLYSWEM GFGIRYGKSR RNAKGGKCMQ EITCVNSGKP NMGGKSRRCE CTALIRLLRT  240
DDNGWYVTQH RKVHNHAFST TYGNKVHWPS HKHLDKYTRD LVRQLRHNNV NLGVYDTIAS  300
FFGRMENVPF SKRSIRTLCG EVIREQADGD ARKTMETAVA SGERPENHTG EETTFNCLDL  360
ASTTLGSPNT PVDPLRYPEQ DDPHSNAEAG RLADLLLAFG DCHLVLKSCT YDDLINSNGT  420
MSGLEEAVKA VTPHRQQGIF GDLWSRAHNS GGVVSAQVLT IKDLFRFTRW LTTTTGQHNL  480
RCVQQRVKLV NSGKAVLEPE QIALLHLYQA ENDEYSVKMN KLQGERDAKI AHYMAKIDEA  540
RKSFEVSIQA AKQHYPVSAS YVALDSNELR GQCWTMYLAQ CRKEAKDLNA KASNIVEKYG  600
PEVIQRHLFE FCSQETNRQA LLKYAQTKVN KLKEAGGARE DTLHDYMTLL EIEKAYALLA  660
AEEQIANGPD TCGGSEDADH GNRNNTIARG EAAEGARGDG HDGGEGASEG PPRQKRQRND  720
QDYVWW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	8e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG023800.1