PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG021820.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 273aa MW: 30622.9 Da PI: 5.9258

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG021820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	76.7	3.6e-24	31	127	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyf 82 +Wt+++v++L+++ ++++e+ +++ kk++W+++sk+m rg+++sp+qC++k+++lnkryk+++++ +++ t++++++ +++ TRIDC5BG021820.1 31 KWTDSMVKLLVTLASYTGEDPGADLgcgrrncamvHKKGKWKAISKVMGVRGCNVSPQQCEDKFNDLNKRYKRLTDILGRGrTCKVVENPALL 123 7*******************8633466677888****************************************9989****** PP trihelix 83 dqle 86 d+++ TRIDC5BG021820.1 124 DRMD 127 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MSDDEEHGLN EDTTDSHSGK GKKGSTWQRM KWTDSMVKLL VTLASYTGED PGADLGCGRR 60 NCAMVHKKGK WKAISKVMGV RGCNVSPQQC EDKFNDLNKR YKRLTDILGR GRTCKVVENP 120 ALLDRMDNLS DKLKDDARKT LSSRHLFYEE MCSYHNNNRI SLPEDPALQH SLQFALRCKE 180 ENDMMRGASG DADEDDQSSD SDYEEDNDED HHVAHSNKGG LPMQKKMRYT ADHEDASFGN 240 SLSAHECSRR TNPHGIALDI NEVVPDGTSL ALT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	9e-75	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG021820.1