PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG015420.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 212aa MW: 24262 Da PI: 6.88 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.4 | 6.9e-18 | 28 | 71 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC5BG015420.2 28 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 71 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MHAGAGLKRT GKSCRLRWLN YLRPDVKRGN FTADEQLLIL DLHSRWGNRW SKIAQHLPGR 60 TDNEIKNYWR TRVQKHAKQL NCDANSSKFK DAMKYLWMPR LADHHLQQAS TVGDHLVPGL 120 PTSYMESSGM VTSSSDSFAS ESYDGARCTN ASVGEMIQGG DWVQEQNQGF WPESNQTFQL 180 QDSELSGWVQ GFSESESLAE NFWSLEDIWK MQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 4e-57 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG015420.2 |