PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG014590.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 243aa    MW: 27598.6 Da    PI: 10.3079
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG014590.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.81e-1769114148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rgr+T+ E+ l++++++++G++ W++Iar+++ gRt++++k++w++++
  TRIDC5BG014590.8  69 RGRMTPHEERLILELHARWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 114
                       89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
QLPSLPTSFI LLLPNRLEFI KDLVLKLEPT STQRKKSKKT GSQPIQGLNR TGKSCRLRWV  60
NYLHPGLKRG RMTPHEERLI LELHARWGNR WSRIARKLPG RTDNEIKNYW RTHMRKKAQE  120
RKRNVSPSSS SSSVTYQSIQ PQTPSIMGIG EQELHGGSSC ITSILKGTPA DMDGYLMDQI  180
WMEIEAPSGV NFHDGKDNSY SSPSGPLLPS PMWDYYSPEA GWKMDEIKMA PQVSYSKGIG  240
PSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.31e-50MYB family protein